Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847361.1_cds_XP_016510056.1_22938
CDS Infomation

[gene=LOC107827423] [db_xref=GeneID:107827423] [protein=uncharacterized protein LOC107827423 isoform X2] [protein_id=XP_016510056.1] [location=complement(join(76316..76464,76920..76986,77392..77567,79307..79376,79977..80195,80359..80464,81291..81401,81652..81799,82285..82807,83364..83510))] [gbkey=CDS]
Sequence

ATGTCGGGAAAAATGGAGGAGGTGGCTCCGATGGAGGAAGTGGTGCAGGCATTGCTGGAA
TGCATGGTGGAACCATTATTAGGGCGTAATTCTTTCAAATCAAAGGATGTTCCAACACTT
GATCAACAACGTTCCATGGCAAAACATGTGGAAGCTGTTGTGTTGCTCTACAACTACTAC
TATAGGAAGCAACATCAAGATCATAAAATAGAGTTTCTTAATTTTACATCATTTTGCCAA
TTGGCTGTAGTTTTGAAACCAAGTTTGGTGACATATATGAAATTAATGCGTCGATCAGAT
TACACAGACGTGGACGATTTGGAAAGCCAAATCTCGCTCACTGAGAAGGCAATTATGCGG
GCATGTGATATATCTTCGGCACTGGATGCTGCACAAGTTGATCCACTATCAGAGAAATGG
CCTATTTCCAAAGTTGTTGTATTCTTAGTTGACTCAAGGAGGGAGAATTGCTTGCTCATG
CGTAGTTCTATGACCTATGCTGTTTGGTCCATTATTGAAAAACATCTTGACGTCTCCTCA
GGTTATCTTTTTGATTCAAAGTGTATAAACAAAAAGAAAAGATCTACTAATATACCTTCA
ACCAGTTCTCAGTATACTGATGGAGCAGGCCTCGAAGAGCTTGCGCTTTCTGCTGCCGCA
GAAGCAACAGGCATCAATAGAAATGATCTGGTTGTCCTAGAGAGCCACCTTGTATATTCC
TTAGATAAAGAAAAAGAAGCAGCTCGATTATATCTTGTACAATTCACTAAGTCTGTCAAT
GAAGATTTTATGGTTCCTATTGGAGACGTCATTGAAAGCTTGCAGGGTCCTCTAATCAAG
AAAATCCTAAGTGGATGGGCGGTTTCTCCAGCTGTTGAGTATTTTCACTTGATGCCCTAC
AGAGATATGTTGTCGAATTGGTATTCTAGGGAGCTGTTACCAAATGGCTTGCAAGATCTA
ACTGTAGAACTGGTAGCTGGTCATGCATATGATGTACATATTGGAGGTAGCTCTAGTGAG
AAAGAAGTAAATGAGGAGAACGTGGTTCAACTCATGATTAAGTCGTGCAATACTGATTGT
GATGATGAAAAGATTGTTGAAGCGAAAAGAAGAGGCATTCAGGGGCTCTCTGCAGTAGGC
TCGTCTCAGTTGGATTCTCAACATTCTGAGGATGTAGTAACCGCTTTGGCTTCAAAGGAA
TCTGCAATATCACGATCTGCCTTGACTGTTCTTTACTGGAAAAGAGAGAAACTGAGTTCT
CAGCTACGCACTTTGGAAGATGAGATTGCATTGTGTGATAAAACTATTCGGACAGTATTA
AATGGAGATGAAAATGATTTACCATTGAAGATTGAAGCTCTTGTAGATGGCTGTAATGAC
GTGTGTGTGAAAGGTGAAGGAGTTGAGTACAATACCAATCAACTGGTAGAAGACCAATCT
ATTTATAGCAAGGGAAAAAGATTGTCCGAGGCCATTCTTACTTTGCAAAACCAATGTCAG
CAATTGGATCAACTGTGCTGCAGGAGTAACTGGGCATTGCCAACATATCGGGTCTTTCCA
TTTGAGGGTGGATTTCAAGCCAAAGTCATTGTGAAAGGTGCAGATTTCGAATTTACCAGT
GAAAGCAACATACGTGAGAGTCCGCGTGAAGCAAGGGAGTCCGCTGCTGCACACATGATT
GCGGAAGTAGCTCGCATCTCAGGTCAGAATCAATAG

Peptide Sequence

PEP ID

XP_016510056.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107827423 isoform X2 [Nicotiana tabacum]
Sequence

MSGKMEEVAPMEEVVQALLECMVEPLLGRNSFKSKDVPTLDQQRSMAKHVEAVVLLYNYY
YRKQHQDHKIEFLNFTSFCQLAVVLKPSLVTYMKLMRRSDYTDVDDLESQISLTEKAIMR
ACDISSALDAAQVDPLSEKWPISKVVVFLVDSRRENCLLMRSSMTYAVWSIIEKHLDVSS
GYLFDSKCINKKKRSTNIPSTSSQYTDGAGLEELALSAAAEATGINRNDLVVLESHLVYS
LDKEKEAARLYLVQFTKSVNEDFMVPIGDVIESLQGPLIKKILSGWAVSPAVEYFHLMPY
RDMLSNWYSRELLPNGLQDLTVELVAGHAYDVHIGGSSSEKEVNEENVVQLMIKSCNTDC
DDEKIVEAKRRGIQGLSAVGSSQLDSQHSEDVVTALASKESAISRSALTVLYWKREKLSS
QLRTLEDEIALCDKTIRTVLNGDENDLPLKIEALVDGCNDVCVKGEGVEYNTNQLVEDQS
IYSKGKRLSEAILTLQNQCQQLDQLCCRSNWALPTYRVFPFEGGFQAKVIVKGADFEFTS
ESNIRESPREARESAAAHMIAEVARISGQNQ

Transcript Sequence

Gene sequence data has not been registered.